CFSAN SNP Pipeline 2 (CSP2): a pipeline for fast and accurate SNP distance estimation from bacterial genome assemblies
Background Accurate genetic distance estimation from pathogen whole-genome sequence data is critical for public health surveillance, and with respect to food safety it provides crucial information within traceback and outbreak investigations. The computational demands required for contemporary bioin...
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Main Authors: | , , , |
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Format: | Article |
Language: | English |
Published: |
PeerJ Inc.
2025-07-01
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Series: | PeerJ Computer Science |
Subjects: | |
Online Access: | https://peerj.com/articles/cs-2878.pdf |
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