Résultats de la recherche - transcriptomics*

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    Metabolomics and Transcriptomics Reveal Age-Dependent Development of Meat Quality Traits in Jingyuan Chicken par Jiahuan Hu, Wei Zhao, Jinyan Zhao, Jinli Tian, Lijuan Yang, Hua Wang, Siyu Chen, Ruimin Ma, Yaling Gu, Dawei Wei, Juan Zhang

    Publié 2025-07-01

    In this study, we investigated the dynamic changes in muscle lipid content (MLC) deposition in the breast muscle of Jingyuan chickens at different stages (42-, 126-, and 180- days old) using metabolomics. The pH<sub>45min,</sub> a*, and L* were significantly increased in the breast muscl...

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    Single-cell spatial transcriptomics reveals pathogenic mechanism of renal fibrosis in imiquimod-induced lupus nephritis in mice par Yanan Xing, Yanru An, Tian Tian, Li Pu, Zhigang Lu, Ning Liang, Longqi Liu, Zhouchun Shang

    Publié 2025-09-01

    A deeper understanding of the cellular and molecular pathology pathways of renal fibrosis in lupus nephritis (LN) is essential for the accurate disease assessment and the development of novel therapeutic strategies. In this study, we employed advanced spatial transcriptomics technique to elucidate t...

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    Integration of Network Pharmacology, Transcriptomics, and Metabolomics Strategies to Uncover the Mechanism of Chaihuang Qingfu Pill in Treating Sepsis-Induced Liver Injury par Zhang C, Chen F, Jiang Y, Deng J, Yan X, Yin X, Su B, Liu W

    Publié 2025-06-01

    Chenbin Zhang,1 Fang Chen,2 Yu Jiang,2 Jun Deng,1 Xiao Yan,1 Xin Yin,1 Bowu Su,1 Wen Liu1 1Department of Pharmacy, The First Hospital Affiliated with Hunan Normal University (Hunan Provincial People’s Hospital), Changsha, 410005, People’s Republic of China; 2Institute of Emergency Medicine, Departme...

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    Time-resolved dual transcriptomics of Pseudomonas aeruginosa biofilm formation in cystic fibrosis par Núria Crua Asensio, Javier Macho Rendón, Juan José González López, Sílvia Gartner Tizzano, Maria Teresa Martín Gómez, Marc Torrent Burgas

    Publié 2025-12-01

    Pseudomonas aeruginosa biofilms cause severe infections in the airways of patients suffering from cystic fibrosis (CF) that are difficult to eradicate, even with intensive antibiotic therapy. The main goal of this study was to define the dual transcriptional response associated with the formation of...

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    Mechanistic Exploration of Yiqi Zengmian in Regulating the Microenvironment as an Immunopotentiator with the Beijing Bio-Institute of Biological Products Coronavirus Vaccine Based... par Zeyue Yu, Yudong Wang, Jianhui Sun, Xiaotong Zheng, Liyu Hao, Yurong Deng, Jianliang Li, Zongyuan Li, Zhongchao Shan, Weidong Li, Yuling Qiao, Ruili Huo, Yibai Xiong, Hairu Huo, Hui Li, Longfei Lin, Hanhui Huang, Guimin Liu, Aoao Wang, Hongmei Li, Luqi Huang

    Publié 2025-05-01

    <b>Background</b>: Yiqi Zengmian (YQZM) functions as an immunopotentiator by enhancing both cellular and humoral immunity. However, its pharmacodynamic active constituents, particularly those absorbed into the bloodstream, and mechanism of action remain unclear. This study aimed to inves...

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    Interaction of blood-entry components, network pharmacology and transcriptomics to elucidate the mechanism of Wentong plaster in treating primary dysmenorrhea par Zongtong Yang, Ziqi Jiao, Cheng Wang, Xiaojing Li, Mengyu Yuan, Zaiyun Sui, Wenhui Wang, Wenjing Hou

    Publié 2025-07-01

    IntroductionPrimary dysmenorrhea (PD) is characterized by pain during the menstrual cycle, affects women's health. Our group developed a traditional Chinese medicine plaster (Wentong plaster, WTT) for the treatment of PD. However, the underlying mechanisms have not yet been elucidated.MethodsIn...

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    spCLUE: a contrastive learning approach to unified spatial transcriptomics analysis across single-slice and multi-slice data par Xiang Wang, Wei Vivian Li, Hongwei Li

    Publié 2025-06-01

    Abstract Advances in spatial transcriptomics demand new tools to integrate data across tissue slices and identify consistent spatial domains. We introduce spCLUE, a comprehensive framework combining multi-view graph network, contrastive learning, attention mechanisms, and a batch prompting module to...

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    Deciphering spatially confined immune evasion niches in osteosarcoma with 3-D spatial transcriptomics: a literature review par Guangqiang Qiu, Yongcheng Tang, Junhui Zuo, Heng Wu, Yongxian Wan

    Publié 2025-07-01

    Osteosarcoma (OS) is the most common primary malignant bone tumour of childhood, yet five-year survival has plateaued at ~60–70% for localised disease and plunges below 30% once metastasis emerges. Formerly viewed as a cell-intrinsic neoplasm entombed in mineralised bone, OS is now understood as a s...

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    Mining key genes of alkaloid synthesis pathway in lotus leaves based on metabolomics and transcriptomics par LI Shuangqin, WANG Zhongyi, ZHAO Wanyue, CHEN Longqing, HU Huizhen

    Publié 2023-06-01

    In order to explore the molecular mechanism of alkaloid biosynthesis in lotus leaves, metabolomics and transcriptomics sequencing analyses were performed on mature lotus leaves of ‘Taikong Lian’ (high alkaloid content), ‘Juwuba’ (medium alkaloid content) and ‘Dazu Honglian’ (low alkaloid content) cu...

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    Betaine alleviates obesity-related metabolic disorders in rats: insights from microbiomes, lipidomics, and transcriptomics par Xian Wang, Xin Shang, Yan Pan, Yu Fu, Huilian Zhu, Shuxun Yan

    Publié 2025-07-01

    BackgroundBetaine is a natural food component that plays an important role in improving body composition, but the details of its effects on adipose tissue remains to be elucidated. Here, we hypothesize that betaine can alleviate obesity-related metabolic disorders, thus gut microbiota, transcriptomi...

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    Molecular signatures of preeclampsia subtypes determined through integrated weighted gene co-expression network analysis and differential gene expression analysis of placental tran... par Luhao Han, Fabricio da Silva Costa, Fabricio da Silva Costa, Anthony Perkins, Anthony Perkins, Olivia Holland, Olivia Holland

    Publié 2025-07-01

    BackgroundPreeclampsia (PE) is a multisystemic pregnancy syndrome that presents in different clinical subtypes. While placental dysfunction is a critical feature of PE, its contribution to different PE subtypes remains unclear. This study aims to use integrated bioinformatics analysis of placental t...

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    Single-Cell Transcriptomics Unveils the Mechanistic Role of FOSL1 in Cutaneous Wound Healing par Jingbi Meng, Ge Zheng, Yinli Luo, Ling Ge, Zhiqing Liu, Wenhua Huang, Meitong Jin, Yanli Kong, Shanhua Xu, Zhehu Jin, Longquan Pi

    Publié 2025-05-01

    <b>Background:</b> The skin, a complex organ vital for protecting the body against environmental challenges, undergoes a multifaceted wound healing process involving hemostasis, inflammation, proliferation, and remodeling. The transcription factor FOSL1 has been implicated in various cel...

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    Transcriptomics combined with physiological analysis provides insights into the mechanism of resistance to Coleosporium bletiae in Bletilla striata par Qiao Liu, Xi Lu, Qiaofen Wu, Zhibiao Lu, Renjun Qin, Kui Huang, Xun Zou, Ke Xia, Yanni Yang, Shuo Qiu

    Publié 2025-07-01

    IntroductionBletilla striata (Orchidaceae) is a valuable traditional Chinese medicinal plant prized for its dried rhizomes. However, its cultivation faces significant challenges from leaf rust disease caused by Coleosporium bletiae, which causes substantial yield losses.MethodsTo investigate host re...

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    Effects of Rumen-Protected Methionine on Meat Quality, Fatty Acid Composition, Volatile Flavor Compounds and Transcriptomics of <i>Longissimus lumborum</i> of Yak (<i>Bos grunniens... par Xia Wu, Zizhen Zuo, Jiajia Li, Jianhui Fu, Jincheng Zhong, Hui Wang, Haitao Shi, Yanling Huang, Haibo Wang

    Publié 2025-06-01

    Yak (<i>Bos grunniens</i>) meat is popular with a unique flavor and high nutritional value. This study investigated the effects of dietary supplementation with rumen-protected methionine (RPM) on meat quality, fatty acid composition, volatile flavor compounds, and transcriptomics of <...

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    Regulation of Steroidal Alkaloid Biosynthesis in Bulbs of <i>Fritillaria thunbergii</i> Miq. By Shading and Potassium Application: Integrating Transcriptomics and Metabolomics Anal... par Jia Liu, Zixuan Zhu, Leran Wang, Qiang Yuan, Honghai Zhu, Xiaoxiao Sheng, Kejie Zhang, Bingbing Liang, Huizhen Jin, Shumin Wang, Wenjun Weng, Hui Wang, Ning Sui

    Publié 2025-05-01

    <i>Fritillaria thunbergii</i> Miq., a medicinal plant rich in steroidal alkaloids, produces bulbs that clear heat, resolve phlegm, and detoxify. However, excessive yield-oriented cultivation has reduced the number of <i>F. thunbergii</i> plants that meet commercial standards....

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    Transcriptomics revealed potential anti-inflammatory mechanisms of ethanol extracts of propolis and tree gum in lipoteichoic acid and interferon-γ-stimulated RAW264.7 macrophages par Zongze Li, Zhengxin Liu, Yuyang Guo, Yujing Tang, Ting Li, Shuangshuang Gao, Hongzhuan Xuan

    Publié 2025-09-01

    Introduction: Poplar propolis, a traditional Chinese medicine abundant in phenolic acids and flavonoid compounds, demonstrates remarkable anti-inflammatory activity. It is currently widely applied in the pharmaceutical and health product industries for the prevention and adjuvant treatment of variou...

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    Physiology, transcriptomics, and metabolomics reveal the regulation of calcium distribution in tomato under reduced vapor pressure deficit and increased calcium fertilizer par Xuemei Yu, Luqi Niu, Yuxin Liu, Yuhui Zhang, Jianming Li, Shuhui Zhang

    Publié 2025-07-01

    High atmospheric vapor pressure deficit (VPD) reduces the calcium (Ca) distribution in tomato (Solanum lycopersicum L.) fruits, severely reducing fruit mass. Reducing the VPD or increasing Ca fertilizer is an important measure to improve Ca distribution in fruits. However, the mechanism through whic...

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