Search Results - "Frontiers in Bioinformatics"

NeSyDPP-4: discovering DPP-4 inhibitors for diabetes treatment with a neuro-symbolic AI approach by Delower Hossain, Delower Hossain, Ehsan Saghapour, Ehsan Saghapour, Jake Y. Chen, Jake Y. Chen, Jake Y. Chen

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Design of cross-reactive antigens with machine learning and high-throughput experimental evaluation by Chelsy Chesterman, Thomas Desautels, Luz-Jeannette Sierra, Kathryn T. Arrildt, Adam Zemla, Edmond Y. Lau, Shivshankar Sundaram, Jason Laliberte, Lynn Chen, Aaron Ruby, Mark Mednikov, Sylvie Bertholet, Dong Yu, Kate Luisi, Enrico Malito, Corey P. Mallett, Matthew J. Bottomley, Robert A. van den Berg, Daniel Faissol

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Using deep neural networks and LASSO regression to predict miRNA expression changes based on mRNA data by Franz Leonard Böge, Helena U. Zacharias, Stefanie C. Becker, Klaus Jung

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Analysis of histone modifications in key cellular subpopulations in the context of azoospermia using spermatogenic single-cell RNA-seq data by Qiu Wang, Qiu Wang, Hong Yang, Fang Li, Fang Li, Song Ge, Song Ge, Ling Ji, Ling Ji, Xiaofeng Li, Xiaofeng Li

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Bioinformatics analysis of lncRNA and mRNA differentially expressed in patients with cervical cancer by Xiaohua An, Xiaohua An, Xiaoxue Huang, Qiujie Yu, Qiujie Yu, Yiyue Tang, Yan Wang, Yan Wang, Huasu Chen, Huasu Chen, Yafei Zhang, Yafei Zhang, Qianhao Huang, Qianhao Huang, Yudi Rao, Yudi Rao, Guomei Hu, He Zha

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Long-read microbial genome assembly, gene prediction and functional annotation: a service of the MIRRI ERIC Italian node by Sandro Gepiro Contaldo, Sandro Gepiro Contaldo, Antonio d’Acierno, Lorenzo Bosio, Francesco Venice, Elisa Li Perottino, Janneth Estefania Hoyos Rea, Giovanna Cristina Varese, Francesca Cordero, Francesca Cordero, Marco Beccuti, Marco Beccuti

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Integrative machine learning and bioinformatics analysis to identify cellular senescence-related genes and potential therapeutic targets in ulcerative colitis and colorectal cancer by Tianle Xue, Yunpeng Chen, Xiaomeng Li, Zhixiang Zhou, Qiyang Chen

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The bacteriostatic regulation of luteolin from honeysuckle by protein network interaction by Jianfeng Zhang, Mujun Chen, Dianzeng Yang, Yanjie Jia

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GenoPath: a pipeline to infer tumor clone composition, mutational history, and metastatic cell migration events from tumor DNA sequencing data by Ryan M. Tobin, Ryan M. Tobin, Shikha Singh, Shikha Singh, Sudhir Kumar, Sudhir Kumar, Sayaka Miura, Sayaka Miura

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Identification of immune and major depressive disorder-related diagnostic markers for early nonalcoholic fatty liver disease by WGCNA and machine learning by Yuyun Jia, Yanping Cao, Qin Yin, Xueqian Li, Xiu Wen

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ngx-mol-viewers: Angular components for interactive molecular visualization in bioinformatics by Damiano Clementel, Damiano Clementel, Alessio Del Conte, Alexander Miguel Monzon, Silvio C. E. Tosatto, Silvio C. E. Tosatto

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NfκBin: a machine learning based method for screening TNF-α induced NF-κB inhibitors by Shipra Jain, Ritu Tomer, Sumeet Patiyal, Gajendra P. S. Raghava

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Comparative transcriptome analysis of different tissues of Hylomecon japonica provides new insights into the biosynthesis pathway of triterpenoid saponins by Bing He, Teng Xu, Shaowei Xu, Huqiang Fang, Qingshan Yang, Qingshan Yang

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In-silico molecular analysis and blocking of the viral G protein of Nipah virus interacting with ephrin B2 and B3 receptor by using peptide mass fingerprinting by Ayesha Sajjad, Ihteshamul Haq, Rabia Syed, Faheem Anwar, Muhammad Hamza, Muhammad Hamza, Muhammad Musharaf, Tehmina Kiani, Faisal Nouroz

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Integrated single-cell and bulk RNA dequencing to identify and validate prognostic genes related to T Cell senescence in acute myeloid leukemia by Mengyao Sha, Jun Chen, Haifeng Hou, Huaihui Dou, Yan Zhang

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Understanding the selectivity in silico of colistin and daptomycin toward gram-negative and gram-positive bacteria, respectively, from the interaction with membrane phospholipids by Yesid Aristizabal, Yamil Liscano, José Oñate-Garzón

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IDRdecoder: a machine learning approach for rational drug discovery toward intrinsically disordered regions by Clara Shionyu-Mitusyama, Satoshi Ohmori, Subaru Hirata, Hirokazu Ishida, Tsuyoshi Shirai, Tsuyoshi Shirai

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Computational investigation of potential natural compounds as inhibitors of monkeypox virus cysteine proteinase by Riya Nalwa, Anis Ahmad Chaudhary, Mandeep Chouhan, Prashant Kumar Tiwari, Saurabh Gupta, Hassan Ahmed Rudayni, Vivek Dhar Dwivedi, Vivek Dhar Dwivedi, Sanjay Kumar, Sanjay Kumar, Sanjay Kumar

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