The critical role of diet, exercise, and sleep in shaping the gut microbiota of children with idiopathic short stature: a Retrospective study

ObjectivesTo investigate the gut microbiota in children with varying degrees of idiopathic short stature (ISS) and to examine the relationship between their intestinal microbiota and lifestyle factors, including diet, exercise, medication, sleep, and psychological state.MethodsA retrospective study...

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Main Authors: Qin Zeng, Jun Zhu, Yanling Hu, Shaoyu Su, Jing Chen
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-08-01
Series:Frontiers in Immunology
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Online Access:https://www.frontiersin.org/articles/10.3389/fimmu.2025.1566722/full
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author Qin Zeng
Qin Zeng
Jun Zhu
Jun Zhu
Yanling Hu
Yanling Hu
Shaoyu Su
Shaoyu Su
Jing Chen
Jing Chen
author_facet Qin Zeng
Qin Zeng
Jun Zhu
Jun Zhu
Yanling Hu
Yanling Hu
Shaoyu Su
Shaoyu Su
Jing Chen
Jing Chen
author_sort Qin Zeng
collection DOAJ
description ObjectivesTo investigate the gut microbiota in children with varying degrees of idiopathic short stature (ISS) and to examine the relationship between their intestinal microbiota and lifestyle factors, including diet, exercise, medication, sleep, and psychological state.MethodsA retrospective study involving 58 ISS children was conducted from May to October 2022. Lifestyle data were collected using questionnaires. Fecal samples were analyzed using 16S rRNA gene sequencing to assess microbiota diversity and composition. LEfSe analysis identified differential bacterial communities between ISS-2SD and ISS-3SD groups (LDA score ≥ 2.5). Spearman correlation analysis explored the relationship between microbiota diversity, dominant taxa, and lifestyle factors, visualized in a heatmap.ResultsNo significant differences in alpha diversity of intestinal microbiota were observed among children with varying degrees of short stature at the ISS, but differences were noted in the dominant microbiota. The ISS-2SD group had Leptotrichiaceae and Sneathia as predominant members, whereas the ISS-3SD group was dominated by Lachnoclostridium, Thermous_scotoductus and Thermoles. Correlation analysis revealed that microbiota diversity was linked to diet, especially legume consumption (Shannon index: r=0.372, P=0.004; Simpson index: r=0.379, P=0.003). At the genus level, Prevotella was positively correlated with beverage intake (r=0.262, P=0.047) and sleep quality (r=0.324, P=0.013), while Ezakiella was negatively correlated with meat intake (r=-0.297, P=0.024), Other genera exhibited significant correlations with diet, exercise, and sleep.ConclusionChildren with varying degrees of short stature exhibited differences in their dominant intestinal microbiota. Diet, exercise, and sleep appear to be significant factors influencing these microbial changes in ISS children.
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spelling doaj-art-9df61f7c54d84f2c8adfc0057d6ff72c2025-08-01T04:10:21ZengFrontiers Media S.A.Frontiers in Immunology1664-32242025-08-011610.3389/fimmu.2025.15667221566722The critical role of diet, exercise, and sleep in shaping the gut microbiota of children with idiopathic short stature: a Retrospective studyQin Zeng0Qin Zeng1Jun Zhu2Jun Zhu3Yanling Hu4Yanling Hu5Shaoyu Su6Shaoyu Su7Jing Chen8Jing Chen9Department of Pediatrics Nursing, West China Second University Hospital, Sichuan University, Chengdu, ChinaKey Laboratory of Birth Defects and Related Diseases of Women and Children (Sichuan University), Ministry of Education, Chengdu, Sichuan, ChinaKey Laboratory of Birth Defects and Related Diseases of Women and Children (Sichuan University), Ministry of Education, Chengdu, Sichuan, ChinaNational Office for Maternal and Child Health Surveillance of China, National Center for Birth Defect Surveillance of China, Department of Pediatrics, West China Second University Hospital, Chengdu, ChinaDepartment of Pediatrics Nursing, West China Second University Hospital, Sichuan University, Chengdu, ChinaKey Laboratory of Birth Defects and Related Diseases of Women and Children (Sichuan University), Ministry of Education, Chengdu, Sichuan, ChinaDepartment of Pediatrics Nursing, West China Second University Hospital, Sichuan University, Chengdu, ChinaKey Laboratory of Birth Defects and Related Diseases of Women and Children (Sichuan University), Ministry of Education, Chengdu, Sichuan, ChinaDepartment of Pediatrics Nursing, West China Second University Hospital, Sichuan University, Chengdu, ChinaKey Laboratory of Birth Defects and Related Diseases of Women and Children (Sichuan University), Ministry of Education, Chengdu, Sichuan, ChinaObjectivesTo investigate the gut microbiota in children with varying degrees of idiopathic short stature (ISS) and to examine the relationship between their intestinal microbiota and lifestyle factors, including diet, exercise, medication, sleep, and psychological state.MethodsA retrospective study involving 58 ISS children was conducted from May to October 2022. Lifestyle data were collected using questionnaires. Fecal samples were analyzed using 16S rRNA gene sequencing to assess microbiota diversity and composition. LEfSe analysis identified differential bacterial communities between ISS-2SD and ISS-3SD groups (LDA score ≥ 2.5). Spearman correlation analysis explored the relationship between microbiota diversity, dominant taxa, and lifestyle factors, visualized in a heatmap.ResultsNo significant differences in alpha diversity of intestinal microbiota were observed among children with varying degrees of short stature at the ISS, but differences were noted in the dominant microbiota. The ISS-2SD group had Leptotrichiaceae and Sneathia as predominant members, whereas the ISS-3SD group was dominated by Lachnoclostridium, Thermous_scotoductus and Thermoles. Correlation analysis revealed that microbiota diversity was linked to diet, especially legume consumption (Shannon index: r=0.372, P=0.004; Simpson index: r=0.379, P=0.003). At the genus level, Prevotella was positively correlated with beverage intake (r=0.262, P=0.047) and sleep quality (r=0.324, P=0.013), while Ezakiella was negatively correlated with meat intake (r=-0.297, P=0.024), Other genera exhibited significant correlations with diet, exercise, and sleep.ConclusionChildren with varying degrees of short stature exhibited differences in their dominant intestinal microbiota. Diet, exercise, and sleep appear to be significant factors influencing these microbial changes in ISS children.https://www.frontiersin.org/articles/10.3389/fimmu.2025.1566722/fullidiopathic short statureintestinal microbiotalifestyle factorscorrelation analysis16S rRNA gene sequencing
spellingShingle Qin Zeng
Qin Zeng
Jun Zhu
Jun Zhu
Yanling Hu
Yanling Hu
Shaoyu Su
Shaoyu Su
Jing Chen
Jing Chen
The critical role of diet, exercise, and sleep in shaping the gut microbiota of children with idiopathic short stature: a Retrospective study
Frontiers in Immunology
idiopathic short stature
intestinal microbiota
lifestyle factors
correlation analysis
16S rRNA gene sequencing
title The critical role of diet, exercise, and sleep in shaping the gut microbiota of children with idiopathic short stature: a Retrospective study
title_full The critical role of diet, exercise, and sleep in shaping the gut microbiota of children with idiopathic short stature: a Retrospective study
title_fullStr The critical role of diet, exercise, and sleep in shaping the gut microbiota of children with idiopathic short stature: a Retrospective study
title_full_unstemmed The critical role of diet, exercise, and sleep in shaping the gut microbiota of children with idiopathic short stature: a Retrospective study
title_short The critical role of diet, exercise, and sleep in shaping the gut microbiota of children with idiopathic short stature: a Retrospective study
title_sort critical role of diet exercise and sleep in shaping the gut microbiota of children with idiopathic short stature a retrospective study
topic idiopathic short stature
intestinal microbiota
lifestyle factors
correlation analysis
16S rRNA gene sequencing
url https://www.frontiersin.org/articles/10.3389/fimmu.2025.1566722/full
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