Distinct pathways for evolution of enhanced receptor binding and cell entry in SARS-like bat coronaviruses.

Understanding the zoonotic risks posed by bat coronaviruses (CoVs) is critical for pandemic preparedness. Herein, we generated recombinant vesicular stomatitis viruses (rVSVs) bearing spikes from divergent bat CoVs to investigate their cell entry mechanisms. Unexpectedly, the successful recovery of...

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Main Authors: Alexandra L Tse, Cory M Acreman, Inna Ricardo-Lax, Jacob Berrigan, Gorka Lasso, Toheeb Balogun, Fiona L Kearns, Lorenzo Casalino, Georgia L McClain, Amartya Mudry Chandran, Charlotte Lemeunier, Rommie E Amaro, Charles M Rice, Rohit K Jangra, Jason S McLellan, Kartik Chandran, Emily Happy Miller
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2024-11-01
Series:PLoS Pathogens
Online Access:https://doi.org/10.1371/journal.ppat.1012704
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author Alexandra L Tse
Cory M Acreman
Inna Ricardo-Lax
Jacob Berrigan
Gorka Lasso
Toheeb Balogun
Fiona L Kearns
Lorenzo Casalino
Georgia L McClain
Amartya Mudry Chandran
Charlotte Lemeunier
Rommie E Amaro
Charles M Rice
Rohit K Jangra
Jason S McLellan
Kartik Chandran
Emily Happy Miller
author_facet Alexandra L Tse
Cory M Acreman
Inna Ricardo-Lax
Jacob Berrigan
Gorka Lasso
Toheeb Balogun
Fiona L Kearns
Lorenzo Casalino
Georgia L McClain
Amartya Mudry Chandran
Charlotte Lemeunier
Rommie E Amaro
Charles M Rice
Rohit K Jangra
Jason S McLellan
Kartik Chandran
Emily Happy Miller
author_sort Alexandra L Tse
collection DOAJ
description Understanding the zoonotic risks posed by bat coronaviruses (CoVs) is critical for pandemic preparedness. Herein, we generated recombinant vesicular stomatitis viruses (rVSVs) bearing spikes from divergent bat CoVs to investigate their cell entry mechanisms. Unexpectedly, the successful recovery of rVSVs bearing the spike from SHC014-CoV, a SARS-like bat CoV, was associated with the acquisition of a novel substitution in the S2 fusion peptide-proximal region (FPPR). This substitution enhanced viral entry in both VSV and coronavirus contexts by increasing the availability of the spike receptor-binding domain to recognize its cellular receptor, ACE2. A second substitution in the S1 N-terminal domain, uncovered through the rescue and serial passage of a virus bearing the FPPR substitution, further enhanced spike:ACE2 interaction and viral entry. Our findings identify genetic pathways for adaptation by bat CoVs during spillover and host-to-host transmission, fitness trade-offs inherent to these pathways, and potential Achilles' heels that could be targeted with countermeasures.
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publisher Public Library of Science (PLoS)
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spelling doaj-art-8c50ea905a7e4bea9a75b86521c09bc32025-07-22T05:31:11ZengPublic Library of Science (PLoS)PLoS Pathogens1553-73661553-73742024-11-012011e101270410.1371/journal.ppat.1012704Distinct pathways for evolution of enhanced receptor binding and cell entry in SARS-like bat coronaviruses.Alexandra L TseCory M AcremanInna Ricardo-LaxJacob BerriganGorka LassoToheeb BalogunFiona L KearnsLorenzo CasalinoGeorgia L McClainAmartya Mudry ChandranCharlotte LemeunierRommie E AmaroCharles M RiceRohit K JangraJason S McLellanKartik ChandranEmily Happy MillerUnderstanding the zoonotic risks posed by bat coronaviruses (CoVs) is critical for pandemic preparedness. Herein, we generated recombinant vesicular stomatitis viruses (rVSVs) bearing spikes from divergent bat CoVs to investigate their cell entry mechanisms. Unexpectedly, the successful recovery of rVSVs bearing the spike from SHC014-CoV, a SARS-like bat CoV, was associated with the acquisition of a novel substitution in the S2 fusion peptide-proximal region (FPPR). This substitution enhanced viral entry in both VSV and coronavirus contexts by increasing the availability of the spike receptor-binding domain to recognize its cellular receptor, ACE2. A second substitution in the S1 N-terminal domain, uncovered through the rescue and serial passage of a virus bearing the FPPR substitution, further enhanced spike:ACE2 interaction and viral entry. Our findings identify genetic pathways for adaptation by bat CoVs during spillover and host-to-host transmission, fitness trade-offs inherent to these pathways, and potential Achilles' heels that could be targeted with countermeasures.https://doi.org/10.1371/journal.ppat.1012704
spellingShingle Alexandra L Tse
Cory M Acreman
Inna Ricardo-Lax
Jacob Berrigan
Gorka Lasso
Toheeb Balogun
Fiona L Kearns
Lorenzo Casalino
Georgia L McClain
Amartya Mudry Chandran
Charlotte Lemeunier
Rommie E Amaro
Charles M Rice
Rohit K Jangra
Jason S McLellan
Kartik Chandran
Emily Happy Miller
Distinct pathways for evolution of enhanced receptor binding and cell entry in SARS-like bat coronaviruses.
PLoS Pathogens
title Distinct pathways for evolution of enhanced receptor binding and cell entry in SARS-like bat coronaviruses.
title_full Distinct pathways for evolution of enhanced receptor binding and cell entry in SARS-like bat coronaviruses.
title_fullStr Distinct pathways for evolution of enhanced receptor binding and cell entry in SARS-like bat coronaviruses.
title_full_unstemmed Distinct pathways for evolution of enhanced receptor binding and cell entry in SARS-like bat coronaviruses.
title_short Distinct pathways for evolution of enhanced receptor binding and cell entry in SARS-like bat coronaviruses.
title_sort distinct pathways for evolution of enhanced receptor binding and cell entry in sars like bat coronaviruses
url https://doi.org/10.1371/journal.ppat.1012704
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