Environmental DNA Detects Endangered Texas Hornshell and Its Hosts

ABSTRACT Environmental DNA techniques are continuously demonstrating their efficiencies over traditional survey methods for detecting rare species. Unionids have a need for focused conservation efforts as they represent some of the most imperiled aquatic species in North America. Freshwater mussels...

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Main Authors: Daniel H. Mason, Heidi A. Henderson, Thomas W. Franklin, Michael K. Young, Jennifer E. Hernandez, Cory L. Engkjer, Joanna Hatt, Michael K. Schwartz
Format: Article
Language:English
Published: Wiley 2025-07-01
Series:Ecology and Evolution
Subjects:
Online Access:https://doi.org/10.1002/ece3.71397
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author Daniel H. Mason
Heidi A. Henderson
Thomas W. Franklin
Michael K. Young
Jennifer E. Hernandez
Cory L. Engkjer
Joanna Hatt
Michael K. Schwartz
author_facet Daniel H. Mason
Heidi A. Henderson
Thomas W. Franklin
Michael K. Young
Jennifer E. Hernandez
Cory L. Engkjer
Joanna Hatt
Michael K. Schwartz
author_sort Daniel H. Mason
collection DOAJ
description ABSTRACT Environmental DNA techniques are continuously demonstrating their efficiencies over traditional survey methods for detecting rare species. Unionids have a need for focused conservation efforts as they represent some of the most imperiled aquatic species in North America. Freshwater mussels are notoriously difficult to detect using traditional sampling techniques due to their cryptic morphological features, benthic habitat use, and low densities. Further, the persistence of freshwater mussel populations requires that viable fish host species be present during spawning. Therefore, improved conservation tools are needed to detect and monitor both the imperiled unionids as well as their associated fish host species. Here, we developed novel quantitative PCR (qPCR) assays for the detection of the endangered Texas hornshell (Popenaias popeii) and two of its' host species, the gray redhorse (Moxostoma congestum) and blue sucker (Cycleptus elongatus), which are also species of greatest conservation need in New Mexico. All qPCR assays were highly sensitive, species‐specific, and ultimately validated using eDNA samples collected from streams. These assays offer new tools for managers to detect, monitor, and conserve these imperiled species using environmental DNA.
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series Ecology and Evolution
spelling doaj-art-757a7b15e9044d92956e6e5ab64c3d292025-07-29T05:23:10ZengWileyEcology and Evolution2045-77582025-07-01157n/an/a10.1002/ece3.71397Environmental DNA Detects Endangered Texas Hornshell and Its HostsDaniel H. Mason0Heidi A. Henderson1Thomas W. Franklin2Michael K. Young3Jennifer E. Hernandez4Cory L. Engkjer5Joanna Hatt6Michael K. Schwartz7National Genomics Center for Wildlife and Fish Conservation USFS Rocky Mountain Research Station Missoula Montana USANational Genomics Center for Wildlife and Fish Conservation USFS Rocky Mountain Research Station Missoula Montana USANational Genomics Center for Wildlife and Fish Conservation USFS Rocky Mountain Research Station Missoula Montana USANational Genomics Center for Wildlife and Fish Conservation USFS Rocky Mountain Research Station Missoula Montana USANational Genomics Center for Wildlife and Fish Conservation USFS Rocky Mountain Research Station Missoula Montana USANational Genomics Center for Wildlife and Fish Conservation USFS Rocky Mountain Research Station Missoula Montana USANew Mexico Department of Game and Fish Santa Fe New Mexico USANational Genomics Center for Wildlife and Fish Conservation USFS Rocky Mountain Research Station Missoula Montana USAABSTRACT Environmental DNA techniques are continuously demonstrating their efficiencies over traditional survey methods for detecting rare species. Unionids have a need for focused conservation efforts as they represent some of the most imperiled aquatic species in North America. Freshwater mussels are notoriously difficult to detect using traditional sampling techniques due to their cryptic morphological features, benthic habitat use, and low densities. Further, the persistence of freshwater mussel populations requires that viable fish host species be present during spawning. Therefore, improved conservation tools are needed to detect and monitor both the imperiled unionids as well as their associated fish host species. Here, we developed novel quantitative PCR (qPCR) assays for the detection of the endangered Texas hornshell (Popenaias popeii) and two of its' host species, the gray redhorse (Moxostoma congestum) and blue sucker (Cycleptus elongatus), which are also species of greatest conservation need in New Mexico. All qPCR assays were highly sensitive, species‐specific, and ultimately validated using eDNA samples collected from streams. These assays offer new tools for managers to detect, monitor, and conserve these imperiled species using environmental DNA.https://doi.org/10.1002/ece3.71397blue suckerfreshwater musselgray redhorsequantitative PCRRio Grande
spellingShingle Daniel H. Mason
Heidi A. Henderson
Thomas W. Franklin
Michael K. Young
Jennifer E. Hernandez
Cory L. Engkjer
Joanna Hatt
Michael K. Schwartz
Environmental DNA Detects Endangered Texas Hornshell and Its Hosts
Ecology and Evolution
blue sucker
freshwater mussel
gray redhorse
quantitative PCR
Rio Grande
title Environmental DNA Detects Endangered Texas Hornshell and Its Hosts
title_full Environmental DNA Detects Endangered Texas Hornshell and Its Hosts
title_fullStr Environmental DNA Detects Endangered Texas Hornshell and Its Hosts
title_full_unstemmed Environmental DNA Detects Endangered Texas Hornshell and Its Hosts
title_short Environmental DNA Detects Endangered Texas Hornshell and Its Hosts
title_sort environmental dna detects endangered texas hornshell and its hosts
topic blue sucker
freshwater mussel
gray redhorse
quantitative PCR
Rio Grande
url https://doi.org/10.1002/ece3.71397
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