HyenaCircle: a HyenaDNA-based pretrained large language model for long eccDNA prediction

IntroductionExtrachromosomal circular DNA (eccDNA) represents a class of circular DNA molecules derived from chromosomes with diverse roles in disease. Long eccDNAs (typically 1–5 kb) pose detection challenges due to their large size, hindering functional studies. We propose HyenaCircle, a novel dee...

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Bibliographic Details
Main Authors: Fuyu Li, Wenxiang Lu, Yunfei Bai
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-06-01
Series:Frontiers in Genetics
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Online Access:https://www.frontiersin.org/articles/10.3389/fgene.2025.1641162/full
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